bamnostic package ================= .. automodule:: bamnostic :members: :undoc-members: :show-inheritance: Core Module (``bamnostic.core``) -------------------------------- .. automodule:: bamnostic.core :members: :show-inheritance: Bgzip BAM Format (BGZF) file handlers (``bamnostic.bgzf``) ---------------------------------------------------------- .. automodule:: bamnostic.bgzf :members: :show-inheritance: Binary Alignment Map (BAM) file handlers (``bamnostic.bam``) ------------------------------------------------------------ .. automodule:: bamnostic.bam :members: :show-inheritance: BAM Index (BAI) file handler (``bamnostic.bai``) ------------------------------------------------ .. automodule:: bamnostic.bai :members: :show-inheritance: Coordinate-Sorted Index (CSI) file handler (``bamnostic.csi``) -------------------------------------------------------------- .. automodule:: bamnostic.csi :members: :show-inheritance: BAMnostic Utilities (``bamnostic.utils``) ----------------------------------------- .. automodule:: bamnostic.utils :members: :show-inheritance: